[OMPI users] OpenMPI not running any job on Mac OS X 10.12

[Michel Lesoinne]

I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and have
been trying to run simple program.
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install

Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest

The output is:

[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open:
unable to open mca_patcher_overwrite: File not found (ignored)

[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open:
unable to open mca_shmem_mmap: File not found (ignored)

[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open:
unable to open mca_shmem_posix: File not found (ignored)

[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open:
unable to open mca_shmem_sysv: File not found (ignored)

--------------------------------------------------------------------------

It looks like opal_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during opal_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):


opal_shmem_base_select failed

--> Returned value -1 instead of OPAL_SUCCESS

--------------------------------------------------------------------------

Without the --disable-shared in the configuration, then I get:


[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 264

[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line
666

--------------------------------------------------------------------------

It looks like orte_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during orte_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):


pmix server init failed

--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS

--------------------------------------------------------------------------




Has anyone seen this? What am I missing?

[Howard Pritchard]

Hi Michel

It's somewhat unusual to use the disable-shared configure option. That
may be causing this. Could you try to build without using this option and
see if you still see the problem?


Thanks,

Howard

Post by Michel Lesoinne
I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and have
been trying to run simple program.
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install
Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest
unable to open mca_patcher_overwrite: File not found (ignored)
unable to open mca_shmem_mmap: File not found (ignored)
unable to open mca_shmem_posix: File not found (ignored)
unable to open mca_shmem_sysv: File not found (ignored)
--------------------------------------------------------------------------
It looks like opal_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during opal_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
opal_shmem_base_select failed
--> Returned value -1 instead of OPAL_SUCCESS
--------------------------------------------------------------------------
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 264
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line
666
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
Has anyone seen this? What am I missing?
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Jeff Squyres (jsquyres)]

Michel --

Also, did you install Open MPI v2.0.2 over a prior version of Open MPI (i.e., with the same prefix value to configure)? That would almost certainly cause a problem.

Post by Howard Pritchard
Hi Michel
It's somewhat unusual to use the disable-shared configure option. That may be causing this. Could you try to build without using this option and see if you still see the problem?
Thanks,
Howard
I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and have been trying to run simple program.
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install
Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest
[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open: unable to open mca_patcher_overwrite: File not found (ignored)
[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open: unable to open mca_shmem_mmap: File not found (ignored)
[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open: unable to open mca_shmem_posix: File not found (ignored)
[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open: unable to open mca_shmem_sysv: File not found (ignored)
--------------------------------------------------------------------------
It looks like opal_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during opal_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
opal_shmem_base_select failed
--> Returned value -1 instead of OPAL_SUCCESS
--------------------------------------------------------------------------
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad parameter in file ../../orte/orted/pmix/pmix_server.c at line 264
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line 666
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
Has anyone seen this? What am I missing?
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Michel Lesoinne]

No previous version installed. This is a brand new laptop on which no MPI
of any kind was installed previously.

Post by Jeff Squyres (jsquyres)
Michel --
Also, did you install Open MPI v2.0.2 over a prior version of Open MPI
(i.e., with the same prefix value to configure)? That would almost
certainly cause a problem.

Post by Howard Pritchard
Hi Michel
It's somewhat unusual to use the disable-shared configure option. That

may be causing this. Could you try to build without using this option and
see if you still see the problem?

Post by Howard Pritchard
Thanks,
Howard
I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and

have been trying to run simple program.

Post by Howard Pritchard
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install
Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest

unable to open mca_patcher_overwrite: File not found (ignored)
unable to open mca_shmem_mmap: File not found (ignored)
unable to open mca_shmem_posix: File not found (ignored)
unable to open mca_shmem_sysv: File not found (ignored)

Post by Howard Pritchard
------------------------------------------------------------

--------------

Post by Howard Pritchard
It looks like opal_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during opal_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
opal_shmem_base_select failed
--> Returned value -1 instead of OPAL_SUCCESS
------------------------------------------------------------

--------------

Post by Howard Pritchard
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad

parameter in file ../../orte/orted/pmix/pmix_server.c at line 264

Post by Howard Pritchard
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad

parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at
line 666

Post by Howard Pritchard
------------------------------------------------------------

--------------

Post by Howard Pritchard
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
------------------------------------------------------------

--------------

Post by Howard Pritchard
Has anyone seen this? What am I missing?
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

--
Jeff Squyres
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Michel Lesoinne]

I am disabling shared to make it a bit easier, not having to setup the
DYLD_LIBRARY_PATH. But not disabling 'shared' results in similar behavior,
though with different messages (the line numbers are a bit shifted as I
tried to debug some arguments):

*[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 264*

*[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line
666*

*--------------------------------------------------------------------------*

*It looks like orte_init failed for some reason; your parallel process is*

*likely to abort. There are many reasons that a parallel process can*

*fail during orte_init; some of which are due to configuration or*

*environment problems. This failure appears to be an internal failure;*

*here's some additional information (which may only be relevant to an*

*Open MPI developer):*


* pmix server init failed*

* --> Returned value Bad parameter (-5) instead of ORTE_SUCCESS*

--------------------------------------------------------------------------

Post by Howard Pritchard
Hi Michel
It's somewhat unusual to use the disable-shared configure option. That
may be causing this. Could you try to build without using this option and
see if you still see the problem?
Thanks,
Howard

Post by Michel Lesoinne
I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and
have been trying to run simple program.
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install
Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest
unable to open mca_patcher_overwrite: File not found (ignored)
unable to open mca_shmem_mmap: File not found (ignored)
unable to open mca_shmem_posix: File not found (ignored)
unable to open mca_shmem_sysv: File not found (ignored)
------------------------------------------------------------
--------------
It looks like opal_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during opal_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
opal_shmem_base_select failed
--> Returned value -1 instead of OPAL_SUCCESS
------------------------------------------------------------
--------------
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 264
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at
line 666
------------------------------------------------------------
--------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
------------------------------------------------------------
--------------
Has anyone seen this? What am I missing?
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Howard Pritchard]

Hi Michael,

I reproduced this problem on my Mac too:

pn1249323:~/ompi/examples (v2.0.x *)$ mpirun -np 2 ./ring_c

[pn1249323.lanl.gov:94283] mca_base_component_repository_open: unable to
open mca_patcher_overwrite: File not found (ignored)

[pn1249323.lanl.gov:94283] mca_base_component_repository_open: unable to
open mca_shmem_mmap: File not found (ignored)

[pn1249323.lanl.gov:94283] mca_base_component_repository_open: unable to
open mca_shmem_posix: File not found (ignored)

[pn1249323.lanl.gov:94283] mca_base_component_repository_open: unable to
open mca_shmem_sysv: File not found (ignored)

--------------------------------------------------------------------------

It looks like opal_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during opal_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):


opal_shmem_base_select failed

--> Returned value -1 instead of OPAL_SUCCESS

Is there a reason why you are using the --disable-shared option? Can you
use the --disable-dlopen instead?

I'll do some more investigating and open an issue.

Howard

Post by Michel Lesoinne
I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and have
been trying to run simple program.
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install
Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest
unable to open mca_patcher_overwrite: File not found (ignored)
unable to open mca_shmem_mmap: File not found (ignored)
unable to open mca_shmem_posix: File not found (ignored)
unable to open mca_shmem_sysv: File not found (ignored)
--------------------------------------------------------------------------
It looks like opal_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during opal_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
opal_shmem_base_select failed
--> Returned value -1 instead of OPAL_SUCCESS
--------------------------------------------------------------------------
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 264
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at
line 666
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
Has anyone seen this? What am I missing?
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Howard Pritchard]

Hi Michel

Try adding --enable-static to the configure.
That fixed the problem for me.

Howard

Post by Michel Lesoinne
I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and have
been trying to run simple program.
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install
Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest
unable to open mca_patcher_overwrite: File not found (ignored)
unable to open mca_shmem_mmap: File not found (ignored)
unable to open mca_shmem_posix: File not found (ignored)
unable to open mca_shmem_sysv: File not found (ignored)
--------------------------------------------------------------------------
It looks like opal_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during opal_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
opal_shmem_base_select failed
--> Returned value -1 instead of OPAL_SUCCESS
--------------------------------------------------------------------------
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 264
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line
666
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
Has anyone seen this? What am I missing?
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Michel Lesoinne]

Howard,

First, thanks to you and Jeff for looking into this with me. 👍
I tried ../configure --disable-shared --enable-static --prefix ~/.local
The result is the same as without --disable-shared. i.e. I get the
following error:

[Michels-MacBook-Pro.local:92780] [[46617,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 262

[Michels-MacBook-Pro.local:92780] [[46617,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line
666

--------------------------------------------------------------------------

It looks like orte_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during orte_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):


pmix server init failed

--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS

--------------------------------------------------------------------------

Post by Howard Pritchard
Hi Michel
Try adding --enable-static to the configure.
That fixed the problem for me.
Howard

Post by Michel Lesoinne
I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and
have been trying to run simple program.
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install
Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest
unable to open mca_patcher_overwrite: File not found (ignored)
unable to open mca_shmem_mmap: File not found (ignored)
unable to open mca_shmem_posix: File not found (ignored)
unable to open mca_shmem_sysv: File not found (ignored)
------------------------------------------------------------
--------------
It looks like opal_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during opal_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
opal_shmem_base_select failed
--> Returned value -1 instead of OPAL_SUCCESS
------------------------------------------------------------
--------------
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 264
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at
line 666
------------------------------------------------------------
--------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
------------------------------------------------------------
--------------
Has anyone seen this? What am I missing?
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Howard Pritchard]

Hi Michel,

Could you try running the app with

export TMPDIR=/tmp

set in the shell you are using?

Howard


2017-02-02 13:46 GMT-07:00 Michel Lesoinne <***@cmsoftinc.com>:

Howard,

First, thanks to you and Jeff for looking into this with me. 👍
I tried ../configure --disable-shared --enable-static --prefix ~/.local
The result is the same as without --disable-shared. i.e. I get the
following error:

[Michels-MacBook-Pro.local:92780] [[46617,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 262

[Michels-MacBook-Pro.local:92780] [[46617,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line
666

--------------------------------------------------------------------------

It looks like orte_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during orte_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):


pmix server init failed

--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS

--------------------------------------------------------------------------

On Thu, Feb 2, 2017 at 12:29 PM, Howard Pritchard <***@gmail.com>
wrote:

Hi Michel

Try adding --enable-static to the configure.
That fixed the problem for me.

Howard

Michel Lesoinne <***@cmsoftinc.com> schrieb am Mi. 1. Feb. 2017 um
19:07:

I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and have
been trying to run simple program.
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install

Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest

The output is:

[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open:
unable to open mca_patcher_overwrite: File not found (ignored)

[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open:
unable to open mca_shmem_mmap: File not found (ignored)

[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open:
unable to open mca_shmem_posix: File not found (ignored)

[Michels-MacBook-Pro.local:45101] mca_base_component_repository_open:
unable to open mca_shmem_sysv: File not found (ignored)

--------------------------------------------------------------------------

It looks like opal_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during opal_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):


opal_shmem_base_select failed

--> Returned value -1 instead of OPAL_SUCCESS

--------------------------------------------------------------------------

Without the --disable-shared in the configuration, then I get:


[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 264

[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at line
666

--------------------------------------------------------------------------

It looks like orte_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during orte_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):


pmix server init failed

--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS

--------------------------------------------------------------------------




Has anyone seen this? What am I missing?
_______________________________________________
users mailing list
***@lists.open-mpi.org
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Michel Lesoinne]

Hi Howard!
Good news. This makes things work finally.
Thanks.
I think however that it should not be necessary, but if I have to do that
every time, I guess I will 👍

Post by Howard Pritchard
Hi Michel,
Could you try running the app with
export TMPDIR=/tmp
set in the shell you are using?
Howard
Howard,
First, thanks to you and Jeff for looking into this with me. 👍
I tried ../configure --disable-shared --enable-static --prefix ~/.local
The result is the same as without --disable-shared. i.e. I get the
[Michels-MacBook-Pro.local:92780] [[46617,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 262
[Michels-MacBook-Pro.local:92780] [[46617,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at
line 666
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
Hi Michel
Try adding --enable-static to the configure.
That fixed the problem for me.
Howard
I have compiled OpenMPI 2.0.2 on a new Macbook running OS X 10.12 and have
been trying to run simple program.
I configured openmpi with
../configure --disable-shared --prefix ~/.local
make all install
Then I have a simple code only containing a call to MPI_Init.
I compile it with
mpirun -np 2 ./mpitest
unable to open mca_patcher_overwrite: File not found (ignored)
unable to open mca_shmem_mmap: File not found (ignored)
unable to open mca_shmem_posix: File not found (ignored)
unable to open mca_shmem_sysv: File not found (ignored)
--------------------------------------------------------------------------
It looks like opal_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during opal_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
opal_shmem_base_select failed
--> Returned value -1 instead of OPAL_SUCCESS
--------------------------------------------------------------------------
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../orte/orted/pmix/pmix_server.c at line 264
[Michels-MacBook-Pro.local:68818] [[53415,0],0] ORTE_ERROR_LOG: Bad
parameter in file ../../../../../orte/mca/ess/hnp/ess_hnp_module.c at
line 666
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
Has anyone seen this? What am I missing?
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