[OMPI users] Open MPI Java Error

[Mota, Thyago]

I recently installed Open MPI and when I try to run mpirun I get the
following error:

ORTE_ERROR_LOG: Bad parameter in file orted/pmix/pmix_server.c at line 262

ORTE_ERROR_LOG: Bad parameter in file ess_hnp_module.c at line 666

--------------------------------------------------------------------------

It looks like orte_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during orte_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):

pmix server init failed

--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS

[Graham, Nathaniel Richard]

?Hello Thyago,


What is your configure command? Do you know if you are using psm or psm2?


-Nathan


--
Nathaniel Graham
HPC-DES
Los Alamos National Laboratory
________________________________
From: users <users-***@lists.open-mpi.org> on behalf of Mota, Thyago <***@moravian.edu>
Sent: Wednesday, February 8, 2017 10:01 AM
To: ***@lists.open-mpi.org
Subject: [OMPI users] Open MPI Java Error

I recently installed Open MPI and when I try to run mpirun I get the following error:


ORTE_ERROR_LOG: Bad parameter in file orted/pmix/pmix_server.c at line 262

ORTE_ERROR_LOG: Bad parameter in file ess_hnp_module.c at line 666

--------------------------------------------------------------------------

It looks like orte_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during orte_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):

pmix server init failed

--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS

--
Mota, Thyago
Moravian College<http://www.moravian.edu/>

[Jeff Squyres (jsquyres)]

This may or may not be a Java-specific issue.

Are you able to run any Open MPI jobs at all?

Check out these FAQ items:

https://www.open-mpi.org/faq/?category=building#install-overwrite
https://www.open-mpi.org/faq/?category=running#adding-ompi-to-path
https://www.open-mpi.org/faq/?category=running#diagnose-multi-host-problems

​Hello Thyago,
What is your configure command? Do you know if you are using psm or psm2?
-Nathan
--
Nathaniel Graham
HPC-DES
Los Alamos National Laboratory
Sent: Wednesday, February 8, 2017 10:01 AM
Subject: [OMPI users] Open MPI Java Error
ORTE_ERROR_LOG: Bad parameter in file orted/pmix/pmix_server.c at line 262
ORTE_ERROR_LOG: Bad parameter in file ess_hnp_module.c at line 666
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--
Mota, Thyago
Moravian College
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

--
Jeff Squyres
***@cisco.com

[Mota, Thyago]

This error happens just by calling mpirun

Post by Jeff Squyres (jsquyres)
This may or may not be a Java-specific issue.
Are you able to run any Open MPI jobs at all?
https://www.open-mpi.org/faq/?category=building#install-overwrite
https://www.open-mpi.org/faq/?category=running#adding-ompi-to-path
https://www.open-mpi.org/faq/?category=running#diagnose-
multi-host-problems

​Hello Thyago,
What is your configure command? Do you know if you are using psm or

psm2?

-Nathan
--
Nathaniel Graham
HPC-DES
Los Alamos National Laboratory
Sent: Wednesday, February 8, 2017 10:01 AM
Subject: [OMPI users] Open MPI Java Error
I recently installed Open MPI and when I try to run mpirun I get the
ORTE_ERROR_LOG: Bad parameter in file orted/pmix/pmix_server.c at line

262

ORTE_ERROR_LOG: Bad parameter in file ess_hnp_module.c at line 666
------------------------------------------------------------

--------------

It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--
Mota, Thyago
Moravian College
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

--
Jeff Squyres
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Jeff Squyres (jsquyres)]

Post by Mota, Thyago
This error happens just by calling mpirun

Did you read / can you comment on the setups described in the FAQ items?

E.g., did you take care to not install a new version of Open MPI over a prior version? Did you take care to ensure that you are using the same version of Open MPI on all nodes?

...etc.

[Mota, Thyago]

The error was gone after doing the export below (as another post
suggested). Thanks.

export TMPDIR=/tmp

Post by Jeff Squyres (jsquyres)

Post by Mota, Thyago
This error happens just by calling mpirun

Did you read / can you comment on the setups described in the FAQ items?
E.g., did you take care to not install a new version of Open MPI over a
prior version? Did you take care to ensure that you are using the same
version of Open MPI on all nodes?
...etc.
--
Jeff Squyres
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Mota, Thyago]

./configure --enable-mpi-java
--with-jdk-dir=/Library/Java/JavaVirtualMachines/jdk1.8.0_121.jdk/Contents/Home/

What is psm?

​Hello Thyago,
What is your configure command? Do you know if you are using psm or psm2?
-Nathan
--
Nathaniel Graham
HPC-DES
Los Alamos National Laboratory
------------------------------
*Sent:* Wednesday, February 8, 2017 10:01 AM
*Subject:* [OMPI users] Open MPI Java Error
ORTE_ERROR_LOG: Bad parameter in file orted/pmix/pmix_server.c at line 262
ORTE_ERROR_LOG: Bad parameter in file ess_hnp_module.c at line 666
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
pmix server init failed
--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--
Mota, Thyago
Moravian College <http://www.moravian.edu/>
_______________________________________________
users mailing list
https://rfd.newmexicoconsortium.org/mailman/listinfo/users

[Cabral, Matias A]

Hi Thyago,

psm is the user library to run with Intel TruScale cards.
psm2 is for Intel OmniPath.

There is a current problem in the libraries with OMPI java bindings:
https://www.open-mpi.org/faq/?category=java#java_limitations

thanks,

_MAC

From: users [mailto:users-***@lists.open-mpi.org] On Behalf Of Mota, Thyago
Sent: Wednesday, February 08, 2017 9:53 AM
To: Open MPI Users <***@lists.open-mpi.org>
Subject: Re: [OMPI users] Open MPI Java Error

./configure --enable-mpi-java --with-jdk-dir=/Library/Java/JavaVirtualMachines/jdk1.8.0_121.jdk/Contents/Home/

What is psm?

On Wed, Feb 8, 2017 at 12:40 PM, Graham, Nathaniel Richard <***@lanl.gov<mailto:***@lanl.gov>> wrote:

​Hello Thyago,



What is your configure command? Do you know if you are using psm or psm2?



-Nathan
--
Nathaniel Graham
HPC-DES
Los Alamos National Laboratory
________________________________
From: users <users-***@lists.open-mpi.org<mailto:users-***@lists.open-mpi.org>> on behalf of Mota, Thyago <***@moravian.edu<mailto:***@moravian.edu>>
Sent: Wednesday, February 8, 2017 10:01 AM
To: ***@lists.open-mpi.org<mailto:***@lists.open-mpi.org>
Subject: [OMPI users] Open MPI Java Error

I recently installed Open MPI and when I try to run mpirun I get the following error:


ORTE_ERROR_LOG: Bad parameter in file orted/pmix/pmix_server.c at line 262

ORTE_ERROR_LOG: Bad parameter in file ess_hnp_module.c at line 666

--------------------------------------------------------------------------

It looks like orte_init failed for some reason; your parallel process is

likely to abort. There are many reasons that a parallel process can

fail during orte_init; some of which are due to configuration or

environment problems. This failure appears to be an internal failure;

here's some additional information (which may only be relevant to an

Open MPI developer):

pmix server init failed

--> Returned value Bad parameter (-5) instead of ORTE_SUCCESS
--
Mota, Thyago
Moravian College<http://www.moravian.edu/>

_______________________________________________
users mailing list
***@lists.open-mpi.org<mailto:***@lists.open-mpi.org>
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